LLM Mart Basic
@llm-mart · Joined Jun 2026
Execute an implementation plan file produced by $draft-plan or $turboplan. Runs pre-implementation prep, then runs $implement to execute the steps and finalize once they are all done. Use when the user asks to "implement plan", "implement the plan", "execute the plan", "run the p
Interpret third-party feedback by running parallel internal and peer interpretations to surface intent, correctness concerns, and ambiguities. Use when the user asks to "interpret feedback", "interpret comments", "what does this feedback mean", "clarify reviewer intent", "underst
Systematically investigate bugs, test failures, build errors, performance issues, or unexpected behavior by cycling through characterize-isolate-hypothesize-test steps. Use when the user asks to "investigate this bug", "debug this", "figure out why this fails", "find the root cau
Deep architecture report that fans out parallel inspections across different aspects of the codebase (structure, tech stack, APIs, patterns, data flow, dependencies, testing) and synthesizes findings into a comprehensive document at .turbo/codebase-map.md and .turbo/codebase-map.
Capture an out-of-scope improvement opportunity so it doesn't get lost. Use when the user asks to "note improvement", "save improvement", "track this for later", "remember this improvement", "note this idea", "log improvement", "backlog this", or "park this idea". Also invoke pro
Developer onboarding guide that composes architecture mapping, tooling review, and agentic setup review with setup, troubleshooting, and next-steps agents to produce a comprehensive guide at .turbo/onboarding.md and .turbo/onboarding.html. Use when the user asks to "onboard me",
Run an independent peer review via Claude. Use when the user asks to "peer review", "peer review my code", "peer review my plan", "get a second opinion", or "independent review".
Fetch and rank open GitHub issues by community engagement, present the top 3 candidates, and plan implementation for the selected issue. Use when the user asks to "pick next issue", "next issue", "which issue should I work on", "top issues", "most popular issues", "prioritize iss
Stage, format, lint, test, review, smoke test, and re-run itself until stable. Use when the user asks to "polish code", "refine code", "iterate on code quality", "review loop", "clean up, test, and review loop", or "run the polish loop".
Stand up the project's live app and hand it to the user to try a change firsthand, then gate on their verdict before continuing. Use when the user asks to "preview the change", "let me try it", "spin up the app so I can test it", "set it up so I can poke at it", or before finaliz
Recall the reasoning behind a past change from Codex session history when available, falling back to commit diff and surrounding code. Use when the user asks to "recall reasoning", "find reasoning", "look up reasoning", "recall implementation reasoning", "find the rationale", "wh
Iteratively review and revise a plan until no new findings survive evaluation. Use when the user asks to "refine the plan", "iterate on the plan", "tighten the plan", or "improve the plan".
Draft, confirm, and post a single conversational reply to GitHub PR conversation comments (issue comments). The reply addresses all tracked items in one natural-prose message. Use when the user asks to "reply to PR conversation", "post PR conversation replies", or "draft PR conve
Draft, confirm, and post replies to GitHub PR review threads. Handles per-category reply formatting, re-fetches thread resolution state so auto-resolved threads are skipped, and posts via GraphQL. Use when the user asks to "reply to PR threads", "post PR thread replies", or "draf
Choose an implementation path (direct or plan) for evaluated findings and dispatch it. Direct path applies fixes directly; plan path runs $turboplan. Use after $evaluate-findings has tagged findings and they need to be implemented, or when the user asks to "resolve findings", "ap
Evaluate, fix, answer, and reply to GitHub pull request review comments and conversation comments. Handles both change requests (fix or skip) and reviewer questions (explain using reasoning recalled from past Codex session history). Use when the user asks to "resolve PR comments"
Detect agentic coding infrastructure in a project: CLAUDE.md, AGENTS.md, installed skills, MCP servers, hooks, and cross-tool compatibility (Claude Code and Codex CLI). Returns structured findings about agentic readiness without applying changes. Use when the user asks to "review
Review code for bugs, security vulnerabilities, API misuse, consistency issues, simplicity problems, or test coverage gaps by running internal reviews and a peer review in parallel and returning combined findings. Single-concern with a type argument, or full review with no argume
Detect package managers and discover outdated or vulnerable dependencies. Returns structured findings without upgrading. Use when the user asks to "review dependencies", "check for outdated packages", "check dependencies", "scan dependencies", or "dependency review".
Review a plan by running internal reviews and a peer review in parallel and returning combined findings. Use when the user asks to "review my plan", "check my plan", "critique my plan", or wants feedback on a plan.
Healthy nodes, a quiet network, 300 restarts in three days, and a latency budget measured in milliseconds
Discovery worked. Ping worked. Every TCP connection timed out, and later the tunnel only worked when someone had a terminal open.
Every VM came back. The cluster did not. Declarative systems converge on config, and the datapath isn't config.
A surprising share of AI-in-the-terminal failures aren't the AI. They're zsh, and a version of bash from 2006.
A Claude Code plugin turns standalone project configuration into a namespaced, installable extension that teams and communities can update as one unit.
None of the safety came from the model. It came from six boring habits.
Skills package instructions and references. Subagents run work in a separate context and return results. They solve different problems and can be composed deliberately.
Six hours in, one step left, everything green, and the incident that didn't happen
CLAUDE.md carries persistent project context. Skills load reusable procedures when relevant. Separating stable facts from task-specific workflows keeps both easier to maintain.
Twenty minutes recovering secrets that never existed, and the one sentence from a human that ended it
An API request routing a model's tool call through an approval gate to a remote MCP server
31 config keys, two audits, and why the first one was wrong in both directions
The official MCP Registry stores standardized server metadata rather than package code. Publishers verify a namespace, describe installation or remote access, and submit immutable versions.
Everyone looks at the Dockerfile. The file that actually leaked the key was the project file.
Remote MCP authorization uses established OAuth standards, but secure integration still requires issuer validation, least-privilege scopes, protected token handling, and server-side enforcement.
"Copy it over and switch the reference" is two steps, and the outage lives in the one nobody checks
stdio fits local processes and prototypes. Streamable HTTP fits hosted services and shared integrations. The right choice follows where the capability runs and who must reach it.
The most important rule wasn't about what I could change. It was about what I was allowed to display.
Tools perform operations, resources expose readable context, and prompts provide reusable templates. Choosing the correct primitive makes an MCP server easier to understand and govern.
Use MCP Inspector to connect to local or remote servers, inspect capabilities, call tools, read resources, test prompts, and diagnose failures before release.
/browse-files
browse-files
List, search, and inspect ENCODE files by format, type, and assembly
/cite-encode
cite-encode
Generate ENCODE citations for publications, grants, and presentations
/compare-experiments
compare-experiments
Check if two ENCODE experiments are compatible for combined analysis
/cross-reference
cross-reference
Cross-reference ENCODE data with PubMed, GEO, ClinicalTrials, and bioRxiv
/download-encode
download-encode
Download ENCODE files (BED, FASTQ, BAM, bigWig) with MD5 verification
/log-provenance
log-provenance
Log derived files and trace provenance back to ENCODE source data
/manage-credentials
manage-credentials
Store, check, or clear ENCODE API credentials for restricted data
/quality-check
quality-check
Assess ENCODE experiment quality using audit counts and replicate counts
/search-encode
search-encode
Search ENCODE experiments by assay, organ, biosample, or target
/track-experiments
track-experiments
Track ENCODE experiments locally with publications and provenance
/document
Document
Record the present state by mode — decision (ADR, RFC, rule), code (spec, doc, guide, scenario), or research (a ready report or one external material); a gate picks the document type.
/init
Init
First-time Archcore setup — wire host configs, measure the authored context, compose the full first-day seed in one preview, and create it on one confirm; import converts CLAUDE.md, AGENTS.md, rule files, ADRs, and docs into native documents; refresh adds new facts or drills into one domain.
/plan
Plan
Plan a feature or initiative through a computed route — a small fix exits with no documents, one capability gets a spec and a plan, a large initiative gets an umbrella PRD with one spec per capability; start with sdd, sources (market research), iso (regulated work), or research (technical investigation) to run that path directly.
/review
Review
Review branch changes against Archcore docs, or report project health; drift runs staleness detection, deep a full documentation audit, closeout closes a finished feature, experience captures a repeated pattern.
/cite-check
cite-check
Verify that citations actually exist and that the claims they support are faithful to the cited source. Runs deterministic existence checks (Crossref / OpenAlex / Semantic Scholar / arXiv) plus a claim-faithfulness pass via the alterlab-citation-verifier skill.
/lit-review
lit-review
Run a systematic, reproducible literature review on a topic and return an APA 7.0 annotated bibliography with a documented search strategy. Invokes the alterlab-deep-research pipeline in lit-review mode.
/review-paper
review-paper
Run a full multi-perspective peer review of a manuscript, simulating an Editor-in-Chief plus three peer reviewers and a Devil's Advocate, and produce a structured editorial decision and revision roadmap. Invokes the alterlab-paper-reviewer skill.
/research-pipeline
research-pipeline
Orchestrate the end-to-end academic research-to-publication workflow (research, write, integrity check, review, revise, re-review, finalize) with mandatory integrity gates and two-stage peer review. Invokes the alterlab-research-pipeline orchestrator.
/audit-infra
Audit infra
Infrastructure-first security audit — secrets, supply chain, CI/CD, LLM/skill security, OWASP, STRIDE. Complements /audit-solana (program-level)
/audit-solana
Audit solana
Security audit for Solana programs (Anchor/native)
MCP server for reusable prompt templates, multi-step workflow chains, and quality gates. Compose agentic workflows with an operator syntax; export as native ski…
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