LLM Mart Basic
@llm-mart · Joined Jun 2026
Retrieve, verify, and synthesize scientific literature. Use for seminal-paper lookups, evidence summaries, method comparisons, and gap analyses. Every citation must come from a live lookup, never from memory; retractions are checked; the deliverable is argued prose with resolvabl
Configure the local wisp-science runtime — uv/Python bootstrap, Node+scimaster-cli for bear-* literature skills, pixi for bioinformatics multi-env analysis. Detect mainland-China network and apply mirrors. Use when Capabilities shows missing Python/uv/Node/sci/pixi, bootstrap err
Judge and reshape the story told by a manuscript and its figure deck. Use when revising paper structure, testing whether Figure 1 is a hook, ordering figures, moving panels, identifying missing analyses, or defining the claim passed to figure-composer.
Use this skill when the user has attached a PDF, paper, report, or other document and the answer needs its content: summarize a section, compare sections, read specific pages, check the table of contents, or read a value off a figure. The `read` tool cannot parse PDF binary — pyt
Use when creating, migrating, or debugging pixi environments, especially for scientific Python, bioinformatics, single-cell analysis, CUDA/PyTorch, Jupyter/VS Code kernels, conda-to-pixi migration, or conda + PyPI mixed dependency issues.
Inspect a registered execution server before compute planning and interpret its persisted capability profile. Use when a server is added, when the user clicks Probe, before enabling an unfamiliar SSH/WSL resource, or when deciding whether GPU, sudo/root, a scheduler, Python, R, c
Plan, configure, validate, and document portable public-bioinformatics data acquisition. Use for GEO/GSE/GDS, SRA/ENA, TCGA/GDC, GTEx, DepMap, public expression matrices, raw reads, release files, manifests, resumable downloads, and reusable local caches. Keep the workflow provid
Submit recoverable SSH-direct research Runs with live progress cards and model-free monitoring.
Wisp-science's actual agent tool surface and runtime boundaries. Load this when deciding which Wisp tool can perform a task, checking whether Python can reach agent or desktop capabilities, choosing between interactive analysis and persisted Runs, or answering questions about del
Use when designing, reviewing, or implementing single-cell RNA-seq QC in Python or R with a human-in-the-loop, data-driven approach. Trigger for scRNA QC metrics, per-sample diagnosis, threshold discussion, mitochondrial/ambient/doublet assessment, MAD vs fixed cutoffs, or refact
Create, update, validate, and evaluate Wisp skills. Use when authoring a project-local or installable skill, refining its trigger description, adding deterministic scripts or Python sidecars, or testing whether another Agent can follow the workflow.
Turn a scientific conversation, paper takeaway, or figure story into paste-ready social copy. Use when the user asks for 小红书文案, a Xiaohongshu note, 微信/朋友圈, 公众号草稿, a tweet, Twitter/X copy, or share-to-social text from a Wisp session. Ask which platform unless the user already name
Build, audit, authorize, recover, or finalize dynamic Zotero citations and bibliographies in Microsoft Word DOCX files with a protected-source, digest-bound workflow. Use for Word–Zotero citation conversion, static OOXML citation audits, mocked/offline validation, Refresh authori
For each reviewer question on a PR, recall implementation reasoning and compose a raw answer. Use when the user asks to "answer reviewer questions", "draft answers to PR questions", or "explain reviewer questions".
Apply findings by making the suggested code changes. Applies accepted verdicts, escalates ambiguous findings to the user, and offers to note genuine improvements for later. Use when the user asks to "apply findings", "apply fixes", "apply suggestions", "apply accepted findings",
Assess project-wide structural technical debt: complexity hotspots, deprecated API usage, duplication clusters, and architecture rot. Ranks findings by impact and refactor effort into a report at .turbo/technical-debt.md. Use when the user asks to "assess technical debt", "find t
Project-wide health audit pipeline that fans out to all analysis skills in parallel, evaluates findings, and produces a unified report at .turbo/audit.md. Use when the user asks to "audit the project", "run a full audit", "project health check", "audit my code", "codebase audit",
Shared changelog conventions and formatting rules referenced by /create-changelog and /update-changelog. Not typically invoked directly.
Enforce existence, reuse, mirror, and symmetry principles to keep new code minimal and consistent with surrounding code. Use when writing new code in an existing codebase, adding new features, refactoring, or making any code changes.
Run autonomous task execution using the codex CLI. Use when the user asks to "codex exec", "run codex exec", "execute a task with codex", or "delegate to codex".
Fourteen posts of being wrong in production, compressed to checkboxes
Healthy nodes, a quiet network, 300 restarts in three days, and a latency budget measured in milliseconds
Discovery worked. Ping worked. Every TCP connection timed out, and later the tunnel only worked when someone had a terminal open.
Every VM came back. The cluster did not. Declarative systems converge on config, and the datapath isn't config.
A surprising share of AI-in-the-terminal failures aren't the AI. They're zsh, and a version of bash from 2006.
A Claude Code plugin turns standalone project configuration into a namespaced, installable extension that teams and communities can update as one unit.
None of the safety came from the model. It came from six boring habits.
Skills package instructions and references. Subagents run work in a separate context and return results. They solve different problems and can be composed deliberately.
Six hours in, one step left, everything green, and the incident that didn't happen
CLAUDE.md carries persistent project context. Skills load reusable procedures when relevant. Separating stable facts from task-specific workflows keeps both easier to maintain.
Twenty minutes recovering secrets that never existed, and the one sentence from a human that ended it
An API request routing a model's tool call through an approval gate to a remote MCP server
31 config keys, two audits, and why the first one was wrong in both directions
The official MCP Registry stores standardized server metadata rather than package code. Publishers verify a namespace, describe installation or remote access, and submit immutable versions.
Everyone looks at the Dockerfile. The file that actually leaked the key was the project file.
Remote MCP authorization uses established OAuth standards, but secure integration still requires issuer validation, least-privilege scopes, protected token handling, and server-side enforcement.
"Copy it over and switch the reference" is two steps, and the outage lives in the one nobody checks
stdio fits local processes and prototypes. Streamable HTTP fits hosted services and shared integrations. The right choice follows where the capability runs and who must reach it.
The most important rule wasn't about what I could change. It was about what I was allowed to display.
Tools perform operations, resources expose readable context, and prompts provide reusable templates. Choosing the correct primitive makes an MCP server easier to understand and govern.
/bloat-scan
bloat-scan
Scan for codebase bloat using 3-tier progressive analysis: dead code, duplication, God classes, and documentation waste.
/elegant-code-review
elegant-code-review
Review the current working diff against the elegant-code decision ladder and propose deletions, honoring the negligence floor.
/filter-log
filter-log
Suggest tier-1 filter commands for a log file before any compression or paste. Anchors on the log-debugging-hygiene module.
/optimize-context
optimize-context
Analyze and optimize context window usage using MECW principles
/unbloat
unbloat
Remove dead code, duplicate files, and unused dependencies with user approval at each step. Backs up before deleting.
/dismiss
dismiss
The ONLY way to stop the egregore. Human-initiated graceful shutdown that saves all state.
/install-watchdog
install-watchdog
Install the egregore watchdog daemon for automatic session relaunching
/status
status
Show current egregore state and progress
/summon
summon
Summon the egregore to autonomously process work items through the full development lifecycle. Runs indefinitely by default until dismissed.
/uninstall-watchdog
uninstall-watchdog
Remove the egregore watchdog daemon and clean up files
/gauntlet-curate
Gauntlet curate
Add or edit a knowledge annotation
/gauntlet-extract
Gauntlet extract
Rebuild the knowledge base from the current codebase
/gauntlet-graph
gauntlet-graph
Build, search, and query the code knowledge graph
/gauntlet-onboard
Gauntlet onboard
Start or resume a guided onboarding path
/gauntlet-progress
Gauntlet progress
Show challenge accuracy stats, weak areas, and streak
/gauntlet
Gauntlet
Run an ad-hoc gauntlet challenge session (5 questions, random scope)
/configure
configure
Interactive interface to enable/disable rules
/from-hook
from-hook
Convert Python SDK hooks to declarative rules
/help
help
Display help and documentation
/hookify
hookify
Create behavioral rules to prevent unwanted actions
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