LLM Mart Basic
@llm-mart · Joined Jun 2026
Featurizes molecules for machine learning with molfeat — ECFP/MACCS/MAP4 fingerprints, RDKit and Mordred physicochemical descriptors, pharmacophore and shape descriptors, and pretrained embeddings (ChemBERTa, ChemGPT, CheMeleon) exposed as scikit-learn transformers that convert S
Queries the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biomedical relationships across genes, drugs, diseases, phenotypes, pathways, and biological processes. Use when exploring drug-disease or gene-disease links, building disease-centric knowledge subgraphs, or
Loads Therapeutics Data Commons (TDC, PyTDC) AI-ready drug-discovery datasets and benchmarks — ADME, toxicity, drug-target interaction (DTI), scaffold splits, and molecular oracles for therapeutic ML and pharmacological prediction. Use when fetching a standardized benchmark datas
Provides the RDKit cheminformatics toolkit for low-level, fine-grained molecular primitives — SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints, substructure/SMARTS search, 2D/3D coordinate generation, similarity, and reaction handling. Use when custom sanitization,
Drives the Rowan cloud quantum-chemistry platform via its Python API for computational chemistry — pKa prediction, geometry optimization, conformer searching, molecular property calculations, protein-ligand docking (AutoDock Vina), and AI protein cofolding (Chai-1, Boltz-1/2), wi
Builds PyTorch-native graph neural networks with TorchDrug for molecules and proteins, exposing custom GNN architectures, task/dataset abstractions, molecular generation, retrosynthesis planning, and knowledge-graph reasoning. Use when a project specifically needs TorchDrug's dat
Generates professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings — biomarker-stratified patient cohort analyses with outcomes and evidence-based treatment recommendation reports with decision algorithms, supporting GRADE evidence
Prepares ISO 13485 certification documentation for medical device Quality Management Systems (QMS) — gap analysis of existing documentation, Quality Manuals, required procedures and work instructions, and Medical Device Files. Use for ISO 13485 QMS documentation, conducting a doc
Processes and analyzes physiological biosignals with the NeuroKit2 Python toolkit — ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle activity, or eye movements, or when
Reads, writes, and manipulates DICOM (Digital Imaging and Communications in Medicine) medical imaging files with the pydicom Python library. Use when reading/writing/modifying DICOM data, extracting pixel data from CT, MRI, X-ray, or ultrasound images, anonymizing DICOM files, wo
Develops, tests, and validates clinical machine learning models with the PyHealth 2.x healthcare AI toolkit. Use when working with electronic health records (EHR), clinical prediction tasks (mortality, readmission, length of stay, drug recommendation), medical coding systems (ICD
Generates concise (3-4 page), focused medical treatment plans in LaTeX/PDF format across all clinical specialties — general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain management — using SMART goal framew
Verifies that every bibliography entry actually exists by cross-checking Crossref, OpenAlex, Semantic Scholar, and arXiv (no API key required) plus doi.org DOI registration, fuzzy-matching title and authors (difflib ratio >= 0.70), flagging retractions recorded by Crossref (inclu
Runs a 13-agent deep research pipeline for rigorous academic work on any topic across 7 modes (full research, quick brief, paper review, lit-review, fact-check, Socratic guided research dialogue, and systematic review with optional meta-analysis), covering research-question formu
Audits and repairs Markdown link health across a skills repo via a four-tier pipeline (config hardening, intra-repo file-ref fixes, external URL substitutions, residual exclusions) and enforces a Tier 3 substitution guardrail that prevents regressions of previously-passing links;
Drafts and revises academic papers through a 12-agent pipeline with hardened LaTeX output (apa7 class, PDF compiled from LaTeX), supporting IMRaD, literature review, theoretical, case study, policy brief, and conference paper structures, APA 7.0 (default), Chicago, MLA, IEEE, and
Orchestrates the full academic research pipeline (research, write, integrity check, review, revise, re-review, re-revise, final integrity check, finalize), coordinating alterlab-deep-research, alterlab-paper-writer, and alterlab-paper-reviewer into a seamless 10-stage workflow wi
The AlterLab front door and multi-agent launcher — routes a task to the right AlterLab skill(s) when the user invokes the suite without naming one, and for a multi-stage goal (or on the keyword 'alterflow', aliases 'alterresearch' / 'ultralab') it clarifies the goal with a few qu
Designs courses and teaching materials using backward design (Wiggins & McTighe), constructive alignment (Biggs), and Bloom's taxonomy alignment, generating rubrics, formative and summative assessments, syllabi, lesson plans, inclusive-pedagogy guidance, and online/hybrid course
Supervises theses and dissertations end to end — structure guidance from proposal through defense, chapter-by-chapter writing support (introduction, literature review, methodology, results, discussion), supervision strategies, committee management, defense and viva voce preparati
Healthy nodes, a quiet network, 300 restarts in three days, and a latency budget measured in milliseconds
Discovery worked. Ping worked. Every TCP connection timed out, and later the tunnel only worked when someone had a terminal open.
Every VM came back. The cluster did not. Declarative systems converge on config, and the datapath isn't config.
A surprising share of AI-in-the-terminal failures aren't the AI. They're zsh, and a version of bash from 2006.
A Claude Code plugin turns standalone project configuration into a namespaced, installable extension that teams and communities can update as one unit.
None of the safety came from the model. It came from six boring habits.
Skills package instructions and references. Subagents run work in a separate context and return results. They solve different problems and can be composed deliberately.
Six hours in, one step left, everything green, and the incident that didn't happen
CLAUDE.md carries persistent project context. Skills load reusable procedures when relevant. Separating stable facts from task-specific workflows keeps both easier to maintain.
Twenty minutes recovering secrets that never existed, and the one sentence from a human that ended it
An API request routing a model's tool call through an approval gate to a remote MCP server
31 config keys, two audits, and why the first one was wrong in both directions
The official MCP Registry stores standardized server metadata rather than package code. Publishers verify a namespace, describe installation or remote access, and submit immutable versions.
Everyone looks at the Dockerfile. The file that actually leaked the key was the project file.
Remote MCP authorization uses established OAuth standards, but secure integration still requires issuer validation, least-privilege scopes, protected token handling, and server-side enforcement.
"Copy it over and switch the reference" is two steps, and the outage lives in the one nobody checks
stdio fits local processes and prototypes. Streamable HTTP fits hosted services and shared integrations. The right choice follows where the capability runs and who must reach it.
The most important rule wasn't about what I could change. It was about what I was allowed to display.
Tools perform operations, resources expose readable context, and prompts provide reusable templates. Choosing the correct primitive makes an MCP server easier to understand and govern.
Use MCP Inspector to connect to local or remote servers, inspect capabilities, call tools, read resources, test prompts, and diagnose failures before release.
/legal-chart
Legal chart
Chart a big legal matter as a wayfinder decision map — grill the attorney breadth-first, create the map and decision tickets, fire research tickets in parallel. Planning only: charting resolves no decisions itself.
/legal-goal
Legal goal
Define a checkable legal success condition for /legal-loop. Accepts a named profile (citations-clean, draft-passes-gate, adversarial-converge, nda-batch-clean, reg-watch, timeline-sourced) or free-text objective. Produces a persisted Goal Record — never starts work itself.
/legal-loop
Legal loop
Iterate a worker-evaluator cycle against a Goal Record until the success condition is met or a stop limit is reached. The evaluator (a different agent than the worker) judges each iteration using MCP verification tools. Produces an auditable verdict trail and a final MET / NOT MET status.
/legal-timeline
Legal timeline
Build a sourced legal chronology from case documents — every event with mandatory provenance, undisputed/alleged/contested status, explicit date conflicts, evidentiary gaps, and optional deadline markers. Outputs table, interactive HTML, and docx under bcc-output/timeline/.
/legal-way
Legal way
Work one ticket from a legal-wayfinder decision map — claim a frontier ticket, resolve it by type (research / grilling / prototype / task), record the decision, graduate newly-sharp fog, and emit the handoff pack when the map is clear.
/legal
Legal
Primary entry point for all BetterCallClaude requests — classifies intent, resolves jurisdiction (via swiss-legal-research), runs inline briefing for complexity 4–6, activates full briefing session when complexity ≥ 7 (via legal-intake skill), and routes to specialist agents or workflow pipelines. Invoked explicitly as /bettercallclaude:legal or as the default when no other command matches. Supports --refine, --briefing, --skip-briefing/--direct, --no-framework flags.
/nda-triage
Nda triage
Triage NDAs against Swiss law — classify as GREEN (standard) / YELLOW (review) / RED (issues) using playbook thresholds and Swiss legal criteria. Supports single file or batch (folder) mode.
/precedent
Precedent
Search and analyze Swiss BGE/ATF/DTF precedents with precedent chain tracking and evolution analysis
/privacy
Privacy
View or change the BetterCallClaude privacy mode (strict/balanced/cloud)
/refine
Refine
Refine vague legal queries into structured prompts through Socratic dialogue, with workflow recommendations and multi-lingual terminology guidance
/research
Research
Search Swiss legal precedents (BGE/ATF/DTF), analyze statutes, and verify citations with multi-lingual support
/setup
Setup
Check MCP server connectivity
/start
Start
Welcome and first-use onboarding — checks MCP connectivity, guides playbook creation, shows usage examples tailored to your profile. Replaces /setup.
/strategy
Strategy
Develop litigation strategy with risk assessment, procedural analysis, cost-benefit calculation, and settlement evaluation for Swiss courts
/summarize
Summarize
Summarize and consolidate multi-agent pipeline output -- deduplicate disclaimers, terminology, and citations with length control (--short, --medium, --long)
/translate
Translate
Translate Swiss legal documents between DE, FR, IT, and EN while preserving legal terminology precision
/validate
Validate
Validate Swiss legal citations in bulk -- check format, existence, and cross-language consistency
/version
Version
Display BetterCallClaude plugin version, installed components, and system status
/workflow
Workflow
Define and execute multi-agent legal workflows -- due diligence, litigation prep, contract lifecycle, real estate closing
/accessibility-audit
Accessibility audit
Audit web accessibility for WCAG compliance with automated axe-core tests, keyboard and screen reader checks, and remediation guidance
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