LLM Mart Basic
@llm-mart · Joined Jun 2026
Loads Therapeutics Data Commons (TDC, PyTDC) AI-ready drug-discovery datasets and benchmarks — ADME, toxicity, drug-target interaction (DTI), scaffold splits, and molecular oracles for therapeutic ML and pharmacological prediction. Use when fetching a standardized benchmark datas
Provides the RDKit cheminformatics toolkit for low-level, fine-grained molecular primitives — SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints, substructure/SMARTS search, 2D/3D coordinate generation, similarity, and reaction handling. Use when custom sanitization,
Drives the Rowan cloud quantum-chemistry platform via its Python API for computational chemistry — pKa prediction, geometry optimization, conformer searching, molecular property calculations, protein-ligand docking (AutoDock Vina), and AI protein cofolding (Chai-1, Boltz-1/2), wi
Builds PyTorch-native graph neural networks with TorchDrug for molecules and proteins, exposing custom GNN architectures, task/dataset abstractions, molecular generation, retrosynthesis planning, and knowledge-graph reasoning. Use when a project specifically needs TorchDrug's dat
Generates professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings — biomarker-stratified patient cohort analyses with outcomes and evidence-based treatment recommendation reports with decision algorithms, supporting GRADE evidence
Prepares ISO 13485 certification documentation for medical device Quality Management Systems (QMS) — gap analysis of existing documentation, Quality Manuals, required procedures and work instructions, and Medical Device Files. Use for ISO 13485 QMS documentation, conducting a doc
Processes and analyzes physiological biosignals with the NeuroKit2 Python toolkit — ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle activity, or eye movements, or when
Reads, writes, and manipulates DICOM (Digital Imaging and Communications in Medicine) medical imaging files with the pydicom Python library. Use when reading/writing/modifying DICOM data, extracting pixel data from CT, MRI, X-ray, or ultrasound images, anonymizing DICOM files, wo
Develops, tests, and validates clinical machine learning models with the PyHealth 2.x healthcare AI toolkit. Use when working with electronic health records (EHR), clinical prediction tasks (mortality, readmission, length of stay, drug recommendation), medical coding systems (ICD
Generates concise (3-4 page), focused medical treatment plans in LaTeX/PDF format across all clinical specialties — general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain management — using SMART goal framew
Verifies that every bibliography entry actually exists by cross-checking Crossref, OpenAlex, Semantic Scholar, and arXiv (no API key required) plus doi.org DOI registration, fuzzy-matching title and authors (difflib ratio >= 0.70), flagging retractions recorded by Crossref (inclu
Runs a 13-agent deep research pipeline for rigorous academic work on any topic across 7 modes (full research, quick brief, paper review, lit-review, fact-check, Socratic guided research dialogue, and systematic review with optional meta-analysis), covering research-question formu
Audits and repairs Markdown link health across a skills repo via a four-tier pipeline (config hardening, intra-repo file-ref fixes, external URL substitutions, residual exclusions) and enforces a Tier 3 substitution guardrail that prevents regressions of previously-passing links;
Drafts and revises academic papers through a 12-agent pipeline with hardened LaTeX output (apa7 class, PDF compiled from LaTeX), supporting IMRaD, literature review, theoretical, case study, policy brief, and conference paper structures, APA 7.0 (default), Chicago, MLA, IEEE, and
Orchestrates the full academic research pipeline (research, write, integrity check, review, revise, re-review, re-revise, final integrity check, finalize), coordinating alterlab-deep-research, alterlab-paper-writer, and alterlab-paper-reviewer into a seamless 10-stage workflow wi
The AlterLab front door and multi-agent launcher — routes a task to the right AlterLab skill(s) when the user invokes the suite without naming one, and for a multi-stage goal (or on the keyword 'alterflow', aliases 'alterresearch' / 'ultralab') it clarifies the goal with a few qu
Designs courses and teaching materials using backward design (Wiggins & McTighe), constructive alignment (Biggs), and Bloom's taxonomy alignment, generating rubrics, formative and summative assessments, syllabi, lesson plans, inclusive-pedagogy guidance, and online/hybrid course
Supervises theses and dissertations end to end — structure guidance from proposal through defense, chapter-by-chapter writing support (introduction, literature review, methodology, results, discussion), supervision strategies, committee management, defense and viva voce preparati
Composes existing AlterLab skills into multi-agent agentic workflows using current Claude Code orchestration primitives — subagents (including nested subagents), dynamic workflow scripts, agent teams, forks, and the Claude Agent SDK: parallel fan-out, sequential pipelines, judge
Scales pandas/NumPy workflows beyond memory with Dask distributed computing — parallel DataFrames, arrays, delayed task graphs, and cluster execution. Use when existing pandas/NumPy code must run on larger-than-RAM data or across clusters, for parallel file processing, distribute
Skills teach Claude a repeatable method, connectors provide governed access to apps and live data, and plugins package related capabilities for installation and sharing.
Use an agent skill to package reusable know-how and workflow instructions. Use an MCP server when an agent needs live, governed access to external data or actions.
Custom commands and skills can both create a slash-invoked workflow in Claude Code. The important choice is how the workflow is discovered, shared, and permissioned.
A useful Claude skill solves one recurring engineering job, is easy to inspect, and saves more time than it creates in setup and review.
Claude skills can live in your Claude account, your local Claude Code setup, or a repository. Install them where the sessions that need them can load them.
Build a portable AI agent skill from one repeatable job: a precise description, concise instructions, focused resources, and tests that prove it works.
AI agent skills package instructions, scripts, references, and templates into portable folders an agent loads only when the task calls for them.
AI made publishing cheap, which is exactly the problem. What separates a page worth ranking from a competent summary of the first ten results.
A prompt that works once isn't a quality system. Five cases, an observable rubric, and a regression set will tell you whether a change helped.
One character of YAML, four pods that never started, and two safety nets I didn't know were holding. Every restart is an audit. Schedule them before they schedule you.
"Verify your work" isn't an instruction. It's a mood. Here's the version that's an instruction. Verify with a different mechanism than the one that made the claim.
A prompt that works once may still fail in production. A lightweight eval set gives you repeatable cases, a clear rubric, and a way to see whether a prompt change actually improved the workflow.
The best AI tool is not the one with the longest feature list. It is the one that solves a defined job reliably, fits the workflow, handles data appropriately, and remains useful after the novelty wears off.
Use AI to speed research without losing trust. Learn to find primary sources, verify claims, preserve uncertainty, and keep an auditable source trail.
Better prompts aren't magic wording. They're short briefs that hand the model a task, the context it can't infer, the limits, and a quality bar.
A green PR, a controller reporting success, and not one line of the new code running
/lineage-discovery
Lineage discovery
Discover testnet↔mainnet subnet lineage from repo configs and open a PR for review (pass --dry-run to report only)
/capture
capture
Triage raw inbox notes into reviewed repository destinations without deleting their sources.
/clean-ai-writing
clean-ai-writing
Audit and rewrite content to remove AI writing patterns
/content-shipped
content-shipped
Log a completed piece of content to content/log.md after the user confirms it was published.
/dream-apply
dream-apply
Validate a dream artifact, review each proposal, and apply only individually accepted changes.
/dream
dream
Run a curator pass against the validated memory directory and produce a proposal artifact.
/end
end
End a session — log what happened, update state and the decision log, propose memory updates, and check for uncommitted or unpushed work
/find-context
find-context
Find relevant context files by topic. Use when you need to load files for a topic without a slash command, or when a task spans multiple domains.
/migrate-gemini
migrate-gemini
Inventory and migrate selected Gemini CLI workflows with dry-run review and parity checks.
/mine-gemini-workflows
mine-gemini-workflows
Find repeated workflows in selected Gemini CLI sessions and draft portable skills after review.
/reconcile
reconcile
Scan multi-session drift and offer individually reviewed fixes only after explicit approval.
/recover
recover
Scan orphaned worktrees and stale branches, then offer explicit approval-gated cleanup.
/setup
setup
Guided onboarding or import for durable workspace context
/start
start
Start a session — load state files, flag staleness, and give a briefing on current priorities, deadlines, and blockers
/today
today
Create a morning heartbeat from repository state and update the local heartbeat log.
/update
update
Mid-session checkpoint — append progress to today's session log and update state files if a priority shifted, without ending the session
/distribution-audit
distribution-audit
Maintainer-only. Find every file that would newly ship to adopters and decide, one file at a time, whether to ship it or withhold it. Drives the release CLI, which refuses to produce a manifest until every shipping file has an answer.
/gaia-audit
gaia-audit
Audit memory, wiki, and auto-loaded files for duplication, conflicting instructions, and stale content. The default path researches, then asks you a single Apply / Discuss / Decline question; on Apply it applies the report, files any out-of-scope problem as a tech-debt issue, then commits, opens a PR, and merges it on a main-branch run like /update-deps. Pass --apply to re-run the apply-and-publish stage against the most recent report.
/gaia-debt
gaia-debt
Fix the tech-debt backlog, a single issue or a recommended related batch, highest severity then oldest first, on a fresh isolated branch through the audit gate, closing the issue(s) on merge. Pass `list` to see the ordered backlog, `why <issue-number>` to explain the recommendation, or a bare `<issue-number>` to fix that issue directly.
/gaia-fitness
gaia-fitness
Health-check and auto-heal this project's Claude integration, triage, heal, verify, and report an F-to-A+ grade.
Unofficial KakaoTalk CLI and native MCP server for macOS — read, watch, and send messages via Accessibility automation.
1 views 0 likesLocal-first AI action assistant for operators: memory, skills, tools, and permission gates to turn work into controlled action.
2 views 0 likesAgent-driven media library for your cloud drives (Quark 夸克 / 115 / 光鸭 GuangYa / 123网盘 / 天翼 Tianyi)
2 views 0 likesAn open-source desktop AI agent built around Cyrene’s persona and powered by the self-developed Cyrene_Harness framework. It combines immersive character chat w…
2 views 0 likes在 Android 上运行的 AI 编程 Agent,内置 Linux 终端与代码编辑器,支持 MCP 协议扩展。
2 views 0 likesTencentDB Agent Memory is a team-level memory hub for AI Agents — turning conversations, docs, and code into four reusable memory assets (Chat Memory, Skill, LL…
3 views 0 likesFloe — a native iOS/iPadOS AI agent workspace for iPhone and iPad, built for private bring-your-own-key workflows.
2 views 0 likesSpring Boot AI Agent — an out-of-the-box solution that makes your app converse, remember, think, and act.
2 views 0 likesGive your AI agent eyes for PDFs — structured text, tables, OCR, visual evidence, and page-level citations via MCP. Native Rust, local-first.
3 views 0 likesA tiny Claude Code skill that keeps your prompt cache warm during idle sessions, so your next message reads from cache instead of paying full price.
2 views 0 likesMonet — Multi-engine mission control for coding agents (Claude Code and Codex today). Browse, search, and drive your agent sessions from a native desktop app.
0 views 0 likesA DottedSign MCP server that enables AI assistants (Claude, ChatGPT) to manage signing tasks, templates, and document status via natural language.
0 views 0 likesКурируемый handbook по Claude Code на русском: hooks, skills, CLAUDE.md шаблоны, MCP-серверы, кейсы.
0 views 0 likes👾 Open Computer Use – Open-Source Alternative to Codex Computer Use
0 views 0 likesAn open-source AI companion that actually remembers you — runs entirely on your own Mac or server. Desktop pet · long-term memory · proactive companionship · mu…
2 views 0 likesGraphical management tool for Kubernetes on desktop and mobile.
2 views 0 likesOpen-source desktop app for content creation, with an agent runtime and standalone CLI.
2 views 0 likesConnect Claude and ChatGPT to KDAN PDF — upload, edit, compress, protect, redact, and compare PDFs in chat.
2 views 0 likesEkko Studio is a local-first AI workspace for multi-agent chat, coding, and visual workflows, available on desktop and the web.
2 views 0 likesOpen-source native iPhone/iPad client for OpenAI Codex CLI and Claude Code — review diffs, approve actions, steer sessions, and manage Git remotely.
1 views 0 likes