LLM Mart Basic
@llm-mart · Joined Jun 2026
Annotate genetic variants (GWAS hits, eQTLs, rare variants) with ENCODE functional data to interpret non-coding variation. Use when the user has variants of interest and wants to understand their regulatory context, identify causal variants from GWAS loci, assess variant impact o
Comprehensive guide for visualizing ENCODE data including deeptools heatmaps, IGV screenshots, UCSC track hubs, and publication-quality plots. Use when users need to create visualizations of ChIP-seq signal, peak landscapes, genome browser views, or any visual representation of E
Make software health, failure, degradation, and recovery visible through useful observability and diagnostics. Use when adding logs, metrics, traces, health checks, alerts, incident signals, or operational feedback.
Inspect the real repository, environment, dependencies, and runtime evidence before designing or changing software. Use for greenfield construction, unfamiliar codebases, uncertain behavior, or any task where assumptions could create rework.
Reflect on failures, incidents, reviews, and completed software work to turn evidence into durable tests, guardrails, documentation, and process improvements.
Debug software by making failures visible, reproducing them, finding contributing causes, and adding durable regression protection. Use for bugs, failing tests, incidents, regressions, flaky behavior, and unexplained production errors.
Improve software continuously through small, safe, behavior-preserving changes that reduce maintenance cost. Use for refactoring, cleanup, technical debt, naming, duplication, dead code, or post-change polish.
Choose simple, maintainable software designs by removing speculative complexity, comparing alternatives, and making explicit tradeoffs. Use for architecture, API, data-model, dependency, and scope decisions.
Implement software through small, repeatable, integrated vertical slices with clear exit criteria and honest verification. Use when a design is understood and code needs to be built or changed.
Review software with careful attention to correctness, maintainability, security, operations, and meaningful detail. Use for diffs, branches, pull requests, architecture decisions, or final quality checks.
Author a greenfield build blueprint in four gated stages — business logic, tech stack, logic-to-stack mapping, and a phase plan — each requiring explicit user approval before the next. Use when building a new project or a substantial new subsystem from scratch.
Step 0 of consequential software work under Monozukuri. Classify the task, assess its risk tier, choose execute or sensei mode, and compose the sequence of Monozukuri skills and the Definition of Done for it. Skip for trivial one-line edits, pure questions, and throwaway scripts.
Clarify software goals, constraints, stakeholders, and risks before consequential design or implementation work. Use for greenfield ideas, ambiguous requirements, architecture decisions, or changes where misunderstanding would be costly.
Prevent software mistakes through strong boundaries, safe defaults, meaningful tests, and mechanically enforced invariants. Use for TDD, validation, schemas, authorization, edge cases, regression coverage, or reliability-sensitive behavior.
Prepare software for responsible release, migration, deployment, rollback, and handoff with evidence about compatibility, health, ownership, and recovery.
Use when creating or updating AGENTS.md files, .github/copilot-instructions.md, or other AI agent rule files, onboarding AI agents to a project, standardizing agent documentation, or when anyone mentions AGENTS.md, agent rules, project onboarding, or codebase documentation for AI
Record a decision, document existing code, or file a supplied research material. Modes: document decision (ADR, RFC, or rule), document code (spec, doc, guide, or scenario for existing behavior), document research (only when a finished report or one external material is already i
First-time Archcore setup. Wires the host (MCP config, hooks, CLAUDE.md/AGENTS.md managed block), measures the authored context the repo already holds, then composes a first-day seed — stack rule, run guide, data-model, integrations, config, entry points, public surface, a linked
Plan a feature or initiative through a computed route: the conductor derives the canon delta and assembles the document package — from a zero-document null route for small fixes to an umbrella PRD with one spec per capability for large initiatives. Modes, named as the first word:
The pre-merge review of a branch in a project that records its specs, decisions, and rules in .archcore/. Run this first for 'review my branch', 'review the changes before merge', or 'review before merge': it checks the changed code against the project's recorded canon and the ch
Discovery worked. Ping worked. Every TCP connection timed out, and later the tunnel only worked when someone had a terminal open.
Every VM came back. The cluster did not. Declarative systems converge on config, and the datapath isn't config.
A surprising share of AI-in-the-terminal failures aren't the AI. They're zsh, and a version of bash from 2006.
A Claude Code plugin turns standalone project configuration into a namespaced, installable extension that teams and communities can update as one unit.
None of the safety came from the model. It came from six boring habits.
Skills package instructions and references. Subagents run work in a separate context and return results. They solve different problems and can be composed deliberately.
Six hours in, one step left, everything green, and the incident that didn't happen
CLAUDE.md carries persistent project context. Skills load reusable procedures when relevant. Separating stable facts from task-specific workflows keeps both easier to maintain.
Twenty minutes recovering secrets that never existed, and the one sentence from a human that ended it
An API request routing a model's tool call through an approval gate to a remote MCP server
31 config keys, two audits, and why the first one was wrong in both directions
The official MCP Registry stores standardized server metadata rather than package code. Publishers verify a namespace, describe installation or remote access, and submit immutable versions.
Everyone looks at the Dockerfile. The file that actually leaked the key was the project file.
Remote MCP authorization uses established OAuth standards, but secure integration still requires issuer validation, least-privilege scopes, protected token handling, and server-side enforcement.
"Copy it over and switch the reference" is two steps, and the outage lives in the one nobody checks
stdio fits local processes and prototypes. Streamable HTTP fits hosted services and shared integrations. The right choice follows where the capability runs and who must reach it.
The most important rule wasn't about what I could change. It was about what I was allowed to display.
Tools perform operations, resources expose readable context, and prompts provide reusable templates. Choosing the correct primitive makes an MCP server easier to understand and govern.
Use MCP Inspector to connect to local or remote servers, inspect capabilities, call tools, read resources, test prompts, and diagnose failures before release.
Build an MCP server in TypeScript with focused tools, validated schemas, local and remote transports, Inspector tests, and production security controls.
/release-quarantine
Release quarantine
Restore quarantined mail to its recipients in Checkpoint Harmony Email, with task polling
/search-quarantine
Search quarantine
Find messages in Checkpoint Harmony Email by sender, subject, attachment hash or quarantine state
/search-threats
Search threats
Sweep security events in Checkpoint Harmony Email by type, state, severity and date range
/campaign-summary
Campaign summary
Get summary of recent phishing and training campaigns from KnowBe4
/group-report
Group report
Get security awareness metrics for a KnowBe4 group
/phishing-results
Phishing results
View phishing campaign results and click rates from KnowBe4
/training-status
Training status
Check training completion status for users or groups in KnowBe4
/user-risk
User risk
Get risk score and risk history for a KnowBe4 user
/org-health-check
Org health check
Full health check for one Proofpoint Essentials customer org
/search-org
Search org
Resolve a Proofpoint Essentials customer org by name or domain and show its details
/check-threats
Check threats
View recent TAP threat events including blocked messages, delivered threats, and click activity
/decode-url
Decode url
Decode a Proofpoint URL Defense rewritten URL back to the original URL
/investigate-threat
Investigate threat
Deep-dive threat investigation with forensics, campaign context, and remediation options
/release-quarantine
Release quarantine
Release one or more quarantined messages to their intended recipients
/search-quarantine
Search quarantine
Search quarantined messages in Proofpoint by sender, recipient, subject, or reason
/vap-report
Vap report
Get the Very Attacked People (VAP) report showing the most targeted users
/month-end-recon
Month end recon
Run the full billing-drift sweep for a billing period, formatted as a month-end reconciliation report
/renewals
Renewals
List upcoming contract and subscription renewals within a window, sorted by date
/true-up
True up
Run the license true-up reconciliation for one client or the whole portfolio
/search-tickets
Search tickets
Search Freshdesk tickets with the Freshdesk query language — filter by status, priority, agent, group, type, tag, and date — and return a ranked, readable result list
Make any song you can imagine
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