Claude Cursor Skill

spark-optimization

Optimize Apache Spark jobs with partitioning, caching, shuffle optimization, and memory tuning. Use when improving Spark performance, debugging slow jobs, or scaling data processing pipelines.

LLM Mart · 0 points · 14 views 0 listing impressions 0 install-command copies
Virus-scanned Reviewed automatically before listing.

Full trust report

Download wshobson-agents-plugins_data-engineering_skills_spark-optimization-554237f.zip · 5 KB
Part of wshobson/agents — 170 skills

Install

skills CLI npx skills add https://github.com/wshobson/agents/tree/main/plugins/data-engineering/skills/spark-optimization
Claude Code claude plugin marketplace add https://llmmart.ai/marketplace.json && claude plugin install wshobson-agents@llmmart
Git git clone https://github.com/wshobson/agents.git

The skills CLI installs just this skill, for any of its supported agents. Claude Code installs the whole wshobson/agents collection as a plugin from our marketplace. Git is the plain clone.

Skill manifest

Apache Spark Optimization

Production patterns for optimizing Apache Spark jobs including partitioning strategies, memory management, shuffle optimization, and performance tuning.

When to Use This Skill

  • Optimizing slow Spark jobs
  • Tuning memory and executor configuration
  • Implementing efficient partitioning strategies
  • Debugging Spark performance issues
  • Scaling Spark pipelines for large datasets
  • Reducing shuffle and data skew

Core Concepts

1. Spark Execution Model

Driver Program
    ↓
Job (triggered by action)
    ↓
Stages (separated by shuffles)
    ↓
Tasks (one per partition)

2. Key Performance Factors

Factor Impact Solution
Shuffle Network I/O, disk I/O Minimize wide transformations
Data Skew Uneven task duration Salting, broadcast joins
Serialization CPU overhead Use Kryo, columnar formats
Memory GC pressure, spills Tune executor memory
Partitions Parallelism Right-size partitions

Quick Start

from pyspark.sql import SparkSession
from pyspark.sql import functions as F

# Create optimized Spark session
spark = (SparkSession.builder
    .appName("OptimizedJob")
    .config("spark.sql.adaptive.enabled", "true")
    .config("spark.sql.adaptive.coalescePartitions.enabled", "true")
    .config("spark.sql.adaptive.skewJoin.enabled", "true")
    .config("spark.serializer", "org.apache.spark.serializer.KryoSerializer")
    .config("spark.sql.shuffle.partitions", "200")
    .getOrCreate())

# Read with optimized settings
df = (spark.read
    .format("parquet")
    .option("mergeSchema", "false")
    .load("s3://bucket/data/"))

# Efficient transformations
result = (df
    .filter(F.col("date") >= "2024-01-01")
    .select("id", "amount", "category")
    .groupBy("category")
    .agg(F.sum("amount").alias("total")))

result.write.mode("overwrite").parquet("s3://bucket/output/")

Detailed patterns and worked examples

Detailed pattern documentation lives in references/details.md. Read that file when the navigation tier above is insufficient.

Best Practices

Do's

  • Enable AQE - Adaptive query execution handles many issues
  • Use Parquet/Delta - Columnar formats with compression
  • Broadcast small tables - Avoid shuffle for small joins
  • Monitor Spark UI - Check for skew, spills, GC
  • Right-size partitions - 128MB - 256MB per partition

Don'ts

  • Don't collect large data - Keep data distributed
  • Don't use UDFs unnecessarily - Use built-in functions
  • Don't over-cache - Memory is limited
  • Don't ignore data skew - It dominates job time
  • Don't use .count() for existence - Use .take(1) or .isEmpty()
Files (agents)
  • references
    • details.md 9.6 KB
      # spark-optimization — detailed patterns and worked examples
      
      ## Patterns
      
      ### Pattern 1: Optimal Partitioning
      
      ```python
      # Calculate optimal partition count
      def calculate_partitions(data_size_gb: float, partition_size_mb: int = 128) -> int:
          """
          Optimal partition size: 128MB - 256MB
          Too few: Under-utilization, memory pressure
          Too many: Task scheduling overhead
          """
          return max(int(data_size_gb * 1024 / partition_size_mb), 1)
      
      # Repartition for even distribution
      df_repartitioned = df.repartition(200, "partition_key")
      
      # Coalesce to reduce partitions (no shuffle)
      df_coalesced = df.coalesce(100)
      
      # Partition pruning with predicate pushdown
      df = (spark.read.parquet("s3://bucket/data/")
          .filter(F.col("date") == "2024-01-01"))  # Spark pushes this down
      
      # Write with partitioning for future queries
      (df.write
          .partitionBy("year", "month", "day")
          .mode("overwrite")
          .parquet("s3://bucket/partitioned_output/"))
      ```
      
      ### Pattern 2: Join Optimization
      
      ```python
      from pyspark.sql import functions as F
      from pyspark.sql.types import *
      
      # 1. Broadcast Join - Small table joins
      # Best when: One side < 10MB (configurable)
      small_df = spark.read.parquet("s3://bucket/small_table/")  # < 10MB
      large_df = spark.read.parquet("s3://bucket/large_table/")  # TBs
      
      # Explicit broadcast hint
      result = large_df.join(
          F.broadcast(small_df),
          on="key",
          how="left"
      )
      
      # 2. Sort-Merge Join - Default for large tables
      # Requires shuffle, but handles any size
      result = large_df1.join(large_df2, on="key", how="inner")
      
      # 3. Bucket Join - Pre-sorted, no shuffle at join time
      # Write bucketed tables
      (df.write
          .bucketBy(200, "customer_id")
          .sortBy("customer_id")
          .mode("overwrite")
          .saveAsTable("bucketed_orders"))
      
      # Join bucketed tables (no shuffle!)
      orders = spark.table("bucketed_orders")
      customers = spark.table("bucketed_customers")  # Same bucket count
      result = orders.join(customers, on="customer_id")
      
      # 4. Skew Join Handling
      # Enable AQE skew join optimization
      spark.conf.set("spark.sql.adaptive.skewJoin.enabled", "true")
      spark.conf.set("spark.sql.adaptive.skewJoin.skewedPartitionFactor", "5")
      spark.conf.set("spark.sql.adaptive.skewJoin.skewedPartitionThresholdInBytes", "256MB")
      
      # Manual salting for severe skew
      def salt_join(df_skewed, df_other, key_col, num_salts=10):
          """Add salt to distribute skewed keys"""
          # Add salt to skewed side
          df_salted = df_skewed.withColumn(
              "salt",
              (F.rand() * num_salts).cast("int")
          ).withColumn(
              "salted_key",
              F.concat(F.col(key_col), F.lit("_"), F.col("salt"))
          )
      
          # Explode other side with all salts
          df_exploded = df_other.crossJoin(
              spark.range(num_salts).withColumnRenamed("id", "salt")
          ).withColumn(
              "salted_key",
              F.concat(F.col(key_col), F.lit("_"), F.col("salt"))
          )
      
          # Join on salted key
          return df_salted.join(df_exploded, on="salted_key", how="inner")
      ```
      
      ### Pattern 3: Caching and Persistence
      
      ```python
      from pyspark import StorageLevel
      
      # Cache when reusing DataFrame multiple times
      df = spark.read.parquet("s3://bucket/data/")
      df_filtered = df.filter(F.col("status") == "active")
      
      # Cache in memory (MEMORY_AND_DISK is default)
      df_filtered.cache()
      
      # Or with specific storage level
      df_filtered.persist(StorageLevel.MEMORY_AND_DISK_SER)
      
      # Force materialization
      df_filtered.count()
      
      # Use in multiple actions
      agg1 = df_filtered.groupBy("category").count()
      agg2 = df_filtered.groupBy("region").sum("amount")
      
      # Unpersist when done
      df_filtered.unpersist()
      
      # Storage levels explained:
      # MEMORY_ONLY - Fast, but may not fit
      # MEMORY_AND_DISK - Spills to disk if needed (recommended)
      # MEMORY_ONLY_SER - Serialized, less memory, more CPU
      # DISK_ONLY - When memory is tight
      # OFF_HEAP - Tungsten off-heap memory
      
      # Checkpoint for complex lineage
      spark.sparkContext.setCheckpointDir("s3://bucket/checkpoints/")
      df_complex = (df
          .join(other_df, "key")
          .groupBy("category")
          .agg(F.sum("amount")))
      df_complex.checkpoint()  # Breaks lineage, materializes
      ```
      
      ### Pattern 4: Memory Tuning
      
      ```python
      # Executor memory configuration
      # spark-submit --executor-memory 8g --executor-cores 4
      
      # Memory breakdown (8GB executor):
      # - spark.memory.fraction = 0.6 (60% = 4.8GB for execution + storage)
      #   - spark.memory.storageFraction = 0.5 (50% of 4.8GB = 2.4GB for cache)
      #   - Remaining 2.4GB for execution (shuffles, joins, sorts)
      # - 40% = 3.2GB for user data structures and internal metadata
      
      spark = (SparkSession.builder
          .config("spark.executor.memory", "8g")
          .config("spark.executor.memoryOverhead", "2g")  # For non-JVM memory
          .config("spark.memory.fraction", "0.6")
          .config("spark.memory.storageFraction", "0.5")
          .config("spark.sql.shuffle.partitions", "200")
          # For memory-intensive operations
          .config("spark.sql.autoBroadcastJoinThreshold", "50MB")
          # Prevent OOM on large shuffles
          .config("spark.sql.files.maxPartitionBytes", "128MB")
          .getOrCreate())
      
      # Monitor memory usage
      def print_memory_usage(spark):
          """Print current memory usage"""
          sc = spark.sparkContext
          for executor in sc._jsc.sc().getExecutorMemoryStatus().keySet().toArray():
              mem_status = sc._jsc.sc().getExecutorMemoryStatus().get(executor)
              total = mem_status._1() / (1024**3)
              free = mem_status._2() / (1024**3)
              print(f"{executor}: {total:.2f}GB total, {free:.2f}GB free")
      ```
      
      ### Pattern 5: Shuffle Optimization
      
      ```python
      # Reduce shuffle data size
      spark.conf.set("spark.sql.shuffle.partitions", "auto")  # With AQE
      spark.conf.set("spark.shuffle.compress", "true")
      spark.conf.set("spark.shuffle.spill.compress", "true")
      
      # Pre-aggregate before shuffle
      df_optimized = (df
          # Local aggregation first (combiner)
          .groupBy("key", "partition_col")
          .agg(F.sum("value").alias("partial_sum"))
          # Then global aggregation
          .groupBy("key")
          .agg(F.sum("partial_sum").alias("total")))
      
      # Avoid shuffle with map-side operations
      # BAD: Shuffle for each distinct
      distinct_count = df.select("category").distinct().count()
      
      # GOOD: Approximate distinct (no shuffle)
      approx_count = df.select(F.approx_count_distinct("category")).collect()[0][0]
      
      # Use coalesce instead of repartition when reducing partitions
      df_reduced = df.coalesce(10)  # No shuffle
      
      # Optimize shuffle with compression
      spark.conf.set("spark.io.compression.codec", "lz4")  # Fast compression
      ```
      
      ### Pattern 6: Data Format Optimization
      
      ```python
      # Parquet optimizations
      (df.write
          .option("compression", "snappy")  # Fast compression
          .option("parquet.block.size", 128 * 1024 * 1024)  # 128MB row groups
          .parquet("s3://bucket/output/"))
      
      # Column pruning - only read needed columns
      df = (spark.read.parquet("s3://bucket/data/")
          .select("id", "amount", "date"))  # Spark only reads these columns
      
      # Predicate pushdown - filter at storage level
      df = (spark.read.parquet("s3://bucket/partitioned/year=2024/")
          .filter(F.col("status") == "active"))  # Pushed to Parquet reader
      
      # Delta Lake optimizations
      (df.write
          .format("delta")
          .option("optimizeWrite", "true")  # Bin-packing
          .option("autoCompact", "true")  # Compact small files
          .mode("overwrite")
          .save("s3://bucket/delta_table/"))
      
      # Z-ordering for multi-dimensional queries
      spark.sql("""
          OPTIMIZE delta.`s3://bucket/delta_table/`
          ZORDER BY (customer_id, date)
      """)
      ```
      
      ### Pattern 7: Monitoring and Debugging
      
      ```python
      # Enable detailed metrics
      spark.conf.set("spark.sql.codegen.wholeStage", "true")
      spark.conf.set("spark.sql.execution.arrow.pyspark.enabled", "true")
      
      # Explain query plan
      df.explain(mode="extended")
      # Modes: simple, extended, codegen, cost, formatted
      
      # Get physical plan statistics
      df.explain(mode="cost")
      
      # Monitor task metrics
      def analyze_stage_metrics(spark):
          """Analyze recent stage metrics"""
          status_tracker = spark.sparkContext.statusTracker()
      
          for stage_id in status_tracker.getActiveStageIds():
              stage_info = status_tracker.getStageInfo(stage_id)
              print(f"Stage {stage_id}:")
              print(f"  Tasks: {stage_info.numTasks}")
              print(f"  Completed: {stage_info.numCompletedTasks}")
              print(f"  Failed: {stage_info.numFailedTasks}")
      
      # Identify data skew
      def check_partition_skew(df):
          """Check for partition skew"""
          partition_counts = (df
              .withColumn("partition_id", F.spark_partition_id())
              .groupBy("partition_id")
              .count()
              .orderBy(F.desc("count")))
      
          partition_counts.show(20)
      
          stats = partition_counts.select(
              F.min("count").alias("min"),
              F.max("count").alias("max"),
              F.avg("count").alias("avg"),
              F.stddev("count").alias("stddev")
          ).collect()[0]
      
          skew_ratio = stats["max"] / stats["avg"]
          print(f"Skew ratio: {skew_ratio:.2f}x (>2x indicates skew)")
      ```
      
      ## Configuration Cheat Sheet
      
      ```python
      # Production configuration template
      spark_configs = {
          # Adaptive Query Execution (AQE)
          "spark.sql.adaptive.enabled": "true",
          "spark.sql.adaptive.coalescePartitions.enabled": "true",
          "spark.sql.adaptive.skewJoin.enabled": "true",
      
          # Memory
          "spark.executor.memory": "8g",
          "spark.executor.memoryOverhead": "2g",
          "spark.memory.fraction": "0.6",
          "spark.memory.storageFraction": "0.5",
      
          # Parallelism
          "spark.sql.shuffle.partitions": "200",
          "spark.default.parallelism": "200",
      
          # Serialization
          "spark.serializer": "org.apache.spark.serializer.KryoSerializer",
          "spark.sql.execution.arrow.pyspark.enabled": "true",
      
          # Compression
          "spark.io.compression.codec": "lz4",
          "spark.shuffle.compress": "true",
      
          # Broadcast
          "spark.sql.autoBroadcastJoinThreshold": "50MB",
      
          # File handling
          "spark.sql.files.maxPartitionBytes": "128MB",
          "spark.sql.files.openCostInBytes": "4MB",
      }
      ```
      
  • SKILL.md 3.1 KB
    ---
    name: spark-optimization
    description: Optimize Apache Spark jobs with partitioning, caching, shuffle optimization, and memory tuning. Use when improving Spark performance, debugging slow jobs, or scaling data processing pipelines.
    ---
    
    # Apache Spark Optimization
    
    Production patterns for optimizing Apache Spark jobs including partitioning strategies, memory management, shuffle optimization, and performance tuning.
    
    ## When to Use This Skill
    
    - Optimizing slow Spark jobs
    - Tuning memory and executor configuration
    - Implementing efficient partitioning strategies
    - Debugging Spark performance issues
    - Scaling Spark pipelines for large datasets
    - Reducing shuffle and data skew
    
    ## Core Concepts
    
    ### 1. Spark Execution Model
    
    ```
    Driver Program
        ↓
    Job (triggered by action)
        ↓
    Stages (separated by shuffles)
        ↓
    Tasks (one per partition)
    ```
    
    ### 2. Key Performance Factors
    
    | Factor            | Impact                | Solution                      |
    | ----------------- | --------------------- | ----------------------------- |
    | **Shuffle**       | Network I/O, disk I/O | Minimize wide transformations |
    | **Data Skew**     | Uneven task duration  | Salting, broadcast joins      |
    | **Serialization** | CPU overhead          | Use Kryo, columnar formats    |
    | **Memory**        | GC pressure, spills   | Tune executor memory          |
    | **Partitions**    | Parallelism           | Right-size partitions         |
    
    ## Quick Start
    
    ```python
    from pyspark.sql import SparkSession
    from pyspark.sql import functions as F
    
    # Create optimized Spark session
    spark = (SparkSession.builder
        .appName("OptimizedJob")
        .config("spark.sql.adaptive.enabled", "true")
        .config("spark.sql.adaptive.coalescePartitions.enabled", "true")
        .config("spark.sql.adaptive.skewJoin.enabled", "true")
        .config("spark.serializer", "org.apache.spark.serializer.KryoSerializer")
        .config("spark.sql.shuffle.partitions", "200")
        .getOrCreate())
    
    # Read with optimized settings
    df = (spark.read
        .format("parquet")
        .option("mergeSchema", "false")
        .load("s3://bucket/data/"))
    
    # Efficient transformations
    result = (df
        .filter(F.col("date") >= "2024-01-01")
        .select("id", "amount", "category")
        .groupBy("category")
        .agg(F.sum("amount").alias("total")))
    
    result.write.mode("overwrite").parquet("s3://bucket/output/")
    ```
    
    ## Detailed patterns and worked examples
    
    Detailed pattern documentation lives in `references/details.md`. Read that file when the navigation tier above is insufficient.
    
    ## Best Practices
    
    ### Do's
    
    - **Enable AQE** - Adaptive query execution handles many issues
    - **Use Parquet/Delta** - Columnar formats with compression
    - **Broadcast small tables** - Avoid shuffle for small joins
    - **Monitor Spark UI** - Check for skew, spills, GC
    - **Right-size partitions** - 128MB - 256MB per partition
    
    ### Don'ts
    
    - **Don't collect large data** - Keep data distributed
    - **Don't use UDFs unnecessarily** - Use built-in functions
    - **Don't over-cache** - Memory is limited
    - **Don't ignore data skew** - It dominates job time
    - **Don't use `.count()` for existence** - Use `.take(1)` or `.isEmpty()`
    

Comments (0)

Sign in to join the conversation.

No comments yet.

Reviews (0)

No reviews yet.

Related