Claude Skill

point-cloud-lidar

LiDAR and point cloud processing: PDAL pipelines, LAS/LAZ/COPC handling, ground classification, DTM/DSM/CHM generation, canopy and building metrics, and photogrammetric (SfM) point clouds. Use when the primary input is LAS, LAZ, COPC, LiDAR, or an unstructured 3D point cloud. Thi

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Part of muend/geoai-skills — 18 skills

Install

skills CLI npx skills add https://github.com/muend/geoai-skills/tree/main/skills/point-cloud-lidar
Claude Code claude plugin marketplace add https://llmmart.ai/marketplace.json && claude plugin install muend-geoai-skills@llmmart
Git git clone https://github.com/muend/geoai-skills.git

The skills CLI installs just this skill, for any of its supported agents. Claude Code installs the whole muend/geoai-skills collection as a plugin from our marketplace. Git is the plain clone.

Skill manifest

Point Clouds & LiDAR

Purpose: from raw returns to defensible elevation and structure products. The recurring failure modes: trusting vendor classification blindly, mixing return types in surfaces (DSM from last returns, DTM with vegetation), and ignoring point density when choosing output resolution.

First contact with any cloud

pdal info input.laz --summary        # counts, bounds, CRS, classes, returns

Report before touching anything: point count, density (pts/m² — decides achievable raster resolution), CRS (horizontal AND vertical datum — ellipsoidal vs orthometric heights differ by the geoid undulation, tens of meters in places), classification present?, return numbers present?, flight-line overlap artifacts. A cloud without CRS metadata: resolve from the provider, never assume.

Format and scale

Format Use
LAZ Compressed interchange/archive — default
COPC (cloud-optimized LAZ) Streaming/HTTP range access, web viewers
LAS Only when a tool can't read LAZ
Entwine/EPT Massive multi-tile collections, indexed

Tile large collections; process per-tile with buffered edges (~2× search radius) to avoid seam artifacts in filters and surfaces; drop the buffer on write.

PDAL pipeline pattern

{
  "pipeline": [
    "input.laz",
    {"type": "filters.reprojection", "out_srs": "EPSG:32636"},
    {"type": "filters.outlier", "method": "statistical",
     "mean_k": 8, "multiplier": 2.5},
    {"type": "filters.smrf", "slope": 0.15, "window": 18.0,
     "threshold": 0.5, "scalar": 1.2},
    {"type": "writers.las", "filename": "classified.laz",
     "extra_dims": "all"}
  ]
}

Run: pdal pipeline pipeline.json. Denoise BEFORE ground classification (low outliers below ground destroy SMRF/CSF); tune slope up for steep terrain, window to the largest non-ground object (big buildings need bigger windows).

Ground classification & DTM

  • If vendor class 2 (ground) exists: audit it on 2-3 cross-sections (bridges, dense canopy, steep slopes) before trusting; reclassify where it fails.
  • Algorithms: SMRF (PDAL default, robust), CSF (cloth simulation, good in steep forest). Parameters are terrain-dependent — show a cross-section plot as evidence, not just the parameter list.
  • DTM from ground-only points; interpolation: TIN → raster (standard for DTM) or IDW for dense clouds. Output resolution ≥ ~1/√density; a 0.5 m DTM from 1 pt/m² data is invented detail.
  • DSM from first returns / highest-point binning. CHM = DSM − DTM, clamp negatives to 0, and use a pit-free algorithm for forestry (naive CHMs are pocked by within-crown pits).

Structure metrics

  • Forestry: height percentiles (p95 ≈ canopy height), canopy cover (first returns > 2 m / all first returns), density metrics per grid cell or plot; normalize heights against the DTM first (filters.hag_dem or filters.hag_nn). Individual tree detection: local maxima on pit-free CHM + watershed segmentation — validate count against field plots or manual photo-interpretation samples.
  • Buildings: class 6 or planar-patch extraction; building height = p90(roof points HAG); footprint fusion with cadastre/OSM polygons via zonal statistics on HAG.
  • Downstream terrain analysis (slope, watersheds) → terrain-hydrology; DL on point clouds or derived rasters → geo-deep-learning.

SfM/photogrammetric clouds — not LiDAR

Drone photogrammetry clouds have no returns, no canopy penetration (ground under vegetation is guessed), correlated noise, and possible doming from poor camera calibration. A "DTM" from SfM over forest is a canopy model. State the sensor type in every deliverable; use LiDAR-specific claims (penetration, return metrics) only for LiDAR.

Vertical datum: resolve, transform, record

Every elevation product carries three obligations, and the third is the one that gets skipped. Stating the datum in your answer is not recording it. A height product whose vertical datum lives only in a chat reply is indistinguishable from one with no datum at all the moment the file is handed to anyone else.

  1. Resolve. Read the vertical CRS from the header/VLR. Where it is missing or contradicted, resolve it against acquisition metadata (vendor flight report, project spec) or diagnose it: a tile-wide constant offset matching the local geoid undulation is the ellipsoidal-vs-orthometric fingerprint. Never infer a datum from elevation magnitude alone.

  2. Transform. Apply an explicit, named transformation — a compound CRS plus geoid model through filters.reprojection, or a fitted per-tile offset when no geoid grid is available. Re-difference the overlaps afterwards and confirm strips agree within noise.

  3. Record it into the output, not just the reply. Every delivered product must carry, in machine-readable form:

    • the compound or vertical CRS written into the file itself (LAS/LAZ header VLR, GeoTIFF CRS, or PROJJSON in the sidecar);
    • the geoid model name and version actually applied (e.g. EGM2008, GEOID18) and the transformation pipeline or EPSG operation code;
    • the per-tile offsets applied, where correction was per tile, with the control or reference each was fitted against;
    • the source of truth used to resolve an originally missing datum;
    • the residual strip-edge disagreement after correction.

    Emit this as a sidecar (*.prj/PROJJSON, a metadata JSON, or embedded raster tags) alongside the product, and never publish a height product whose vertical datum is unresolved. If the datum cannot be resolved, deliver the product labelled provisional with the unresolved datum recorded in the same metadata block — silence is not an option.

Verification protocol

  1. Cross-sections (2-3, including a building edge and a vegetated slope): ground class hugs terrain, DSM caps surface.
  2. DTM minus known control points / national DEM: report RMSE and check for a constant offset = vertical datum mismatch.
  3. Hillshade the DTM — classification artifacts (pits, pimples, flight-line stripes) are instantly visible.
  4. Report density, CRS + vertical datum, classifier + parameters, and output resolution rationale in the answer — and confirm the verified vertical datum, geoid model, and transformation were written into the output metadata before the product is considered delivered.

Pitfalls checklist

  • Ellipsoidal heights delivered as orthometric (whole product offset by the geoid).
  • Vertical datum resolved during the audit but never written into the delivered product's metadata — the next consumer inherits the same ambiguity you just spent the analysis removing.
  • DTM resolution finer than point density supports.
  • Vendor ground class trusted under dense canopy.
  • CHM with negative values or crown pits (no pit-free processing).
  • Per-tile processing without buffers → seam lines in derivatives.
  • Outlier filter run AFTER ground classification.
  • SfM cloud treated as canopy-penetrating LiDAR.

Execution contract

  • Workflow: inspect header, CRS, vertical datum, density, classes, and returns; tile with buffers; filter noise; classify; derive products; mosaic; validate in 3D and cross-section.
  • Decision rules: use point-cloud workflows when return-level 3D evidence matters, terrain workflows after a validated DEM exists, and separate assumptions for LiDAR versus SfM clouds.
  • Verification protocol: reconcile point counts and classes, inspect buffered seams and cross-sections, compare elevations to control, hillshade derived terrain, and report density-supported resolution.
  • Failure modes: stop for unknown vertical datum, insufficient density, corrupt classification, tile seams, unbounded outliers, or product resolution finer than sampling supports. Never resolve a vertical datum and then ship the product without that datum and its transformation recorded in the output metadata.
  • Deliverables: validated cloud or derived DTM/DSM/CHM, pipeline parameters, CRS and vertical datum, density and class report, QA graphics, accuracy metrics, and limitations. The verified vertical datum, the geoid model and transformation applied, and any per-tile offsets are written into the output metadata or a sidecar, not only into the answer text.
  • Source freshness: consult the authoritative source registry before applying format, quality, or processing rules and record the checked date.
Files (geoai-skills)
  • agents
    • openai.yaml 207 B
      interface:
        display_name: "Point Clouds and LiDAR"
        short_description: "Process LiDAR and 3D point cloud data"
        default_prompt: "Use $point-cloud-lidar to validate and process this point cloud workflow."
      
  • references
    • authoritative-sources.md 781 B
      # Authoritative sources
      
      - Last verified: 2026-07-19
      - Review cadence: every 6 months
      - Refresh triggers: LAS specification, USGS LiDAR specification, or PDAL major release
      
      ## Canonical sources
      
      - [PDAL documentation](https://pdal.io/en/stable/) — point-cloud readers, filters, pipelines, and writers.
      - [ASPRS LAS specification](https://lasformat.org/) — current published LAS format definition maintained by the ASPRS LAS Working Group.
      - [USGS LiDAR Base Specification](https://www.usgs.gov/ngp-standards-and-specifications/lidar-base-specification-online) — quality, classification, and deliverable requirements.
      
      Record acquisition type, LAS version and point format, CRS and vertical datum, units, density, class conventions, PDAL version, and every filter parameter.
      
  • SKILL.md 9.2 KB
    ---
    name: point-cloud-lidar
    description: >-
      LiDAR and point cloud processing: PDAL pipelines, LAS/LAZ/COPC handling,
      ground classification, DTM/DSM/CHM generation, canopy and building
      metrics, and photogrammetric (SfM) point clouds. Use when the primary input
      is LAS, LAZ, COPC, LiDAR, or an unstructured 3D point cloud. This skill owns
      vertical datum agreement, co-registration and the vertical-accuracy budget
      when two acquisitions are differenced with comparability not yet established;
      once datum, geoid and accuracy are documented, a subsidence or
      elevation-change question is change-detection's. Route a derived DEM, DTM,
      DSM or CHM to terrain-hydrology unless point-level classification,
      comparability, or metrics remain in scope.
    license: MIT
    metadata:
      author: Muhammed Enes Duran
    ---
    
    # Point Clouds & LiDAR
    
    Purpose: from raw returns to defensible elevation and structure products.
    The recurring failure modes: **trusting vendor classification blindly**,
    **mixing return types in surfaces** (DSM from last returns, DTM with
    vegetation), and **ignoring point density** when choosing output
    resolution.
    
    ## First contact with any cloud
    
    ```bash
    pdal info input.laz --summary        # counts, bounds, CRS, classes, returns
    ```
    
    Report before touching anything: point count, density (pts/m² — decides
    achievable raster resolution), CRS (horizontal AND vertical datum —
    ellipsoidal vs orthometric heights differ by the geoid undulation, tens of
    meters in places), classification present?, return numbers present?,
    flight-line overlap artifacts. A cloud without CRS metadata: resolve from
    the provider, never assume.
    
    ## Format and scale
    
    | Format | Use |
    |---|---|
    | **LAZ** | Compressed interchange/archive — default |
    | **COPC** (cloud-optimized LAZ) | Streaming/HTTP range access, web viewers |
    | LAS | Only when a tool can't read LAZ |
    | Entwine/EPT | Massive multi-tile collections, indexed |
    
    Tile large collections; process per-tile with buffered edges (~2× search
    radius) to avoid seam artifacts in filters and surfaces; drop the buffer
    on write.
    
    ## PDAL pipeline pattern
    
    ```json
    {
      "pipeline": [
        "input.laz",
        {"type": "filters.reprojection", "out_srs": "EPSG:32636"},
        {"type": "filters.outlier", "method": "statistical",
         "mean_k": 8, "multiplier": 2.5},
        {"type": "filters.smrf", "slope": 0.15, "window": 18.0,
         "threshold": 0.5, "scalar": 1.2},
        {"type": "writers.las", "filename": "classified.laz",
         "extra_dims": "all"}
      ]
    }
    ```
    
    Run: `pdal pipeline pipeline.json`. Denoise BEFORE ground classification
    (low outliers below ground destroy SMRF/CSF); tune `slope` up for steep
    terrain, `window` to the largest non-ground object (big buildings need
    bigger windows).
    
    ## Ground classification & DTM
    
    - If vendor class 2 (ground) exists: **audit it** on 2-3 cross-sections
      (bridges, dense canopy, steep slopes) before trusting; reclassify where
      it fails.
    - Algorithms: SMRF (PDAL default, robust), CSF (cloth simulation, good in
      steep forest). Parameters are terrain-dependent — show a cross-section
      plot as evidence, not just the parameter list.
    - DTM from ground-only points; interpolation: TIN → raster (standard for
      DTM) or IDW for dense clouds. Output resolution ≥ ~1/√density; a 0.5 m
      DTM from 1 pt/m² data is invented detail.
    - DSM from **first returns / highest-point** binning. CHM = DSM − DTM,
      clamp negatives to 0, and use a pit-free algorithm for forestry (naive
      CHMs are pocked by within-crown pits).
    
    ## Structure metrics
    
    - **Forestry**: height percentiles (p95 ≈ canopy height), canopy cover
      (first returns > 2 m / all first returns), density metrics per grid cell
      or plot; normalize heights against the DTM first (`filters.hag_dem` or
      `filters.hag_nn`). Individual tree detection: local maxima on pit-free
      CHM + watershed segmentation — validate count against field plots or
      manual photo-interpretation samples.
    - **Buildings**: class 6 or planar-patch extraction; building height =
      p90(roof points HAG); footprint fusion with cadastre/OSM polygons via
      zonal statistics on HAG.
    - Downstream terrain analysis (slope, watersheds) → `terrain-hydrology`;
      DL on point clouds or derived rasters → `geo-deep-learning`.
    
    ## SfM/photogrammetric clouds — not LiDAR
    
    Drone photogrammetry clouds have no returns, no canopy penetration
    (ground under vegetation is guessed), correlated noise, and possible doming
    from poor camera calibration. A "DTM" from SfM over forest is a canopy
    model. State the sensor type in every deliverable; use LiDAR-specific
    claims (penetration, return metrics) only for LiDAR.
    
    ## Vertical datum: resolve, transform, record
    
    Every elevation product carries three obligations, and the third is the one
    that gets skipped. **Stating the datum in your answer is not recording it.**
    A height product whose vertical datum lives only in a chat reply is
    indistinguishable from one with no datum at all the moment the file is
    handed to anyone else.
    
    1. **Resolve.** Read the vertical CRS from the header/VLR. Where it is
       missing or contradicted, resolve it against acquisition metadata (vendor
       flight report, project spec) or diagnose it: a tile-wide constant offset
       matching the local geoid undulation is the ellipsoidal-vs-orthometric
       fingerprint. Never infer a datum from elevation magnitude alone.
    2. **Transform.** Apply an explicit, named transformation — a compound CRS
       plus geoid model through `filters.reprojection`, or a fitted per-tile
       offset when no geoid grid is available. Re-difference the overlaps
       afterwards and confirm strips agree within noise.
    3. **Record it into the output, not just the reply.** Every delivered
       product must carry, in machine-readable form:
       - the compound or vertical CRS written into the file itself (LAS/LAZ
         header VLR, GeoTIFF CRS, or PROJJSON in the sidecar);
       - the **geoid model name and version** actually applied (e.g. EGM2008,
         GEOID18) and the transformation pipeline or EPSG operation code;
       - the **per-tile offsets applied**, where correction was per tile, with
         the control or reference each was fitted against;
       - the source of truth used to resolve an originally missing datum;
       - the residual strip-edge disagreement after correction.
    
       Emit this as a sidecar (`*.prj`/PROJJSON, a metadata JSON, or embedded
       raster tags) alongside the product, and never publish a height product
       whose vertical datum is unresolved. If the datum cannot be resolved,
       deliver the product labelled provisional with the unresolved datum
       recorded in the same metadata block — silence is not an option.
    
    ## Verification protocol
    
    1. Cross-sections (2-3, including a building edge and a vegetated slope):
       ground class hugs terrain, DSM caps surface.
    2. DTM minus known control points / national DEM: report RMSE and check
       for a constant offset = vertical datum mismatch.
    3. Hillshade the DTM — classification artifacts (pits, pimples,
       flight-line stripes) are instantly visible.
    4. Report density, CRS + vertical datum, classifier + parameters, and
       output resolution rationale in the answer — **and** confirm the verified
       vertical datum, geoid model, and transformation were written into the
       output metadata before the product is considered delivered.
    
    ## Pitfalls checklist
    
    - Ellipsoidal heights delivered as orthometric (whole product offset by
      the geoid).
    - Vertical datum resolved during the audit but never written into the
      delivered product's metadata — the next consumer inherits the same
      ambiguity you just spent the analysis removing.
    - DTM resolution finer than point density supports.
    - Vendor ground class trusted under dense canopy.
    - CHM with negative values or crown pits (no pit-free processing).
    - Per-tile processing without buffers → seam lines in derivatives.
    - Outlier filter run AFTER ground classification.
    - SfM cloud treated as canopy-penetrating LiDAR.
    
    ## Execution contract
    
    - **Workflow:** inspect header, CRS, vertical datum, density, classes, and returns; tile with buffers; filter noise; classify; derive products; mosaic; validate in 3D and cross-section.
    - **Decision rules:** use point-cloud workflows when return-level 3D evidence matters, terrain workflows after a validated DEM exists, and separate assumptions for LiDAR versus SfM clouds.
    - **Verification protocol:** reconcile point counts and classes, inspect buffered seams and cross-sections, compare elevations to control, hillshade derived terrain, and report density-supported resolution.
    - **Failure modes:** stop for unknown vertical datum, insufficient density, corrupt classification, tile seams, unbounded outliers, or product resolution finer than sampling supports. Never resolve a vertical datum and then ship the product without that datum and its transformation recorded in the output metadata.
    - **Deliverables:** validated cloud or derived DTM/DSM/CHM, pipeline parameters, CRS and vertical datum, density and class report, QA graphics, accuracy metrics, and limitations. The verified vertical datum, the geoid model and transformation applied, and any per-tile offsets are written into the output metadata or a sidecar, not only into the answer text.
    - **Source freshness:** consult [the authoritative source registry](references/authoritative-sources.md) before applying format, quality, or processing rules and record the checked date.
    

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