LLM Mart Basic
@llm-mart · Joined Jun 2026
Loads Therapeutics Data Commons (TDC, PyTDC) AI-ready drug-discovery datasets and benchmarks — ADME, toxicity, drug-target interaction (DTI), scaffold splits, and molecular oracles for therapeutic ML and pharmacological prediction. Use when fetching a standardized benchmark datas
Provides the RDKit cheminformatics toolkit for low-level, fine-grained molecular primitives — SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints, substructure/SMARTS search, 2D/3D coordinate generation, similarity, and reaction handling. Use when custom sanitization,
Drives the Rowan cloud quantum-chemistry platform via its Python API for computational chemistry — pKa prediction, geometry optimization, conformer searching, molecular property calculations, protein-ligand docking (AutoDock Vina), and AI protein cofolding (Chai-1, Boltz-1/2), wi
Builds PyTorch-native graph neural networks with TorchDrug for molecules and proteins, exposing custom GNN architectures, task/dataset abstractions, molecular generation, retrosynthesis planning, and knowledge-graph reasoning. Use when a project specifically needs TorchDrug's dat
Generates professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings — biomarker-stratified patient cohort analyses with outcomes and evidence-based treatment recommendation reports with decision algorithms, supporting GRADE evidence
Prepares ISO 13485 certification documentation for medical device Quality Management Systems (QMS) — gap analysis of existing documentation, Quality Manuals, required procedures and work instructions, and Medical Device Files. Use for ISO 13485 QMS documentation, conducting a doc
Processes and analyzes physiological biosignals with the NeuroKit2 Python toolkit — ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle activity, or eye movements, or when
Reads, writes, and manipulates DICOM (Digital Imaging and Communications in Medicine) medical imaging files with the pydicom Python library. Use when reading/writing/modifying DICOM data, extracting pixel data from CT, MRI, X-ray, or ultrasound images, anonymizing DICOM files, wo
Develops, tests, and validates clinical machine learning models with the PyHealth 2.x healthcare AI toolkit. Use when working with electronic health records (EHR), clinical prediction tasks (mortality, readmission, length of stay, drug recommendation), medical coding systems (ICD
Generates concise (3-4 page), focused medical treatment plans in LaTeX/PDF format across all clinical specialties — general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain management — using SMART goal framew
Verifies that every bibliography entry actually exists by cross-checking Crossref, OpenAlex, Semantic Scholar, and arXiv (no API key required) plus doi.org DOI registration, fuzzy-matching title and authors (difflib ratio >= 0.70), flagging retractions recorded by Crossref (inclu
Runs a 13-agent deep research pipeline for rigorous academic work on any topic across 7 modes (full research, quick brief, paper review, lit-review, fact-check, Socratic guided research dialogue, and systematic review with optional meta-analysis), covering research-question formu
Audits and repairs Markdown link health across a skills repo via a four-tier pipeline (config hardening, intra-repo file-ref fixes, external URL substitutions, residual exclusions) and enforces a Tier 3 substitution guardrail that prevents regressions of previously-passing links;
Drafts and revises academic papers through a 12-agent pipeline with hardened LaTeX output (apa7 class, PDF compiled from LaTeX), supporting IMRaD, literature review, theoretical, case study, policy brief, and conference paper structures, APA 7.0 (default), Chicago, MLA, IEEE, and
Orchestrates the full academic research pipeline (research, write, integrity check, review, revise, re-review, re-revise, final integrity check, finalize), coordinating alterlab-deep-research, alterlab-paper-writer, and alterlab-paper-reviewer into a seamless 10-stage workflow wi
The AlterLab front door and multi-agent launcher — routes a task to the right AlterLab skill(s) when the user invokes the suite without naming one, and for a multi-stage goal (or on the keyword 'alterflow', aliases 'alterresearch' / 'ultralab') it clarifies the goal with a few qu
Designs courses and teaching materials using backward design (Wiggins & McTighe), constructive alignment (Biggs), and Bloom's taxonomy alignment, generating rubrics, formative and summative assessments, syllabi, lesson plans, inclusive-pedagogy guidance, and online/hybrid course
Supervises theses and dissertations end to end — structure guidance from proposal through defense, chapter-by-chapter writing support (introduction, literature review, methodology, results, discussion), supervision strategies, committee management, defense and viva voce preparati
Composes existing AlterLab skills into multi-agent agentic workflows using current Claude Code orchestration primitives — subagents (including nested subagents), dynamic workflow scripts, agent teams, forks, and the Claude Agent SDK: parallel fan-out, sequential pipelines, judge
Scales pandas/NumPy workflows beyond memory with Dask distributed computing — parallel DataFrames, arrays, delayed task graphs, and cluster execution. Use when existing pandas/NumPy code must run on larger-than-RAM data or across clusters, for parallel file processing, distribute
A Claude Code plugin turns standalone project configuration into a namespaced, installable extension that teams and communities can update as one unit.
None of the safety came from the model. It came from six boring habits.
Skills package instructions and references. Subagents run work in a separate context and return results. They solve different problems and can be composed deliberately.
Six hours in, one step left, everything green, and the incident that didn't happen
CLAUDE.md carries persistent project context. Skills load reusable procedures when relevant. Separating stable facts from task-specific workflows keeps both easier to maintain.
Twenty minutes recovering secrets that never existed, and the one sentence from a human that ended it
An API request routing a model's tool call through an approval gate to a remote MCP server
31 config keys, two audits, and why the first one was wrong in both directions
The official MCP Registry stores standardized server metadata rather than package code. Publishers verify a namespace, describe installation or remote access, and submit immutable versions.
Everyone looks at the Dockerfile. The file that actually leaked the key was the project file.
Remote MCP authorization uses established OAuth standards, but secure integration still requires issuer validation, least-privilege scopes, protected token handling, and server-side enforcement.
"Copy it over and switch the reference" is two steps, and the outage lives in the one nobody checks
stdio fits local processes and prototypes. Streamable HTTP fits hosted services and shared integrations. The right choice follows where the capability runs and who must reach it.
The most important rule wasn't about what I could change. It was about what I was allowed to display.
Tools perform operations, resources expose readable context, and prompts provide reusable templates. Choosing the correct primitive makes an MCP server easier to understand and govern.
Use MCP Inspector to connect to local or remote servers, inspect capabilities, call tools, read resources, test prompts, and diagnose failures before release.
Build an MCP server in TypeScript with focused tools, validated schemas, local and remote transports, Inspector tests, and production security controls.
An MCP server exposes tools, resources, or prompts through a standard protocol so an AI application can discover and use external capabilities.
Treat an AI agent skill as both an instruction package and a software dependency: inspect what it says, what it runs, what it can access, and how it updates.
Add remote HTTP or local stdio MCP servers to Claude Code, choose the right scope, protect credentials, verify the connection, and test with least privilege.
/attach
Attach
`crabbox attach` follows the recorded events of an active coordinator run and
/azure
Azure
`crabbox azure` groups Azure provider setup commands. It currently has a single
/bench
Bench
`crabbox bench` records and reports local benchmark timing observations. It is a
/cache
Cache
`crabbox cache` inspects, purges, or warms package and build caches on a
/capsule
Capsule
`crabbox capsule` captures, replays, and tracks lightweight failure capsules.
/checkpoint
Checkpoint
Save the state of a lease, then restore it onto another box or fork it into a
/claims
Claims
`crabbox claims list` prints the lease claims stored on the current machine. It
/cleanup
Cleanup
`crabbox cleanup` sweeps direct-provider machines and local provider state that
/code
Code
`crabbox code` bridges a Linux lease's `code-server` workspace into the
/config
Config
`crabbox config` inspects and updates user configuration. It has three
/connect
Connect
`crabbox connect` resolves a lease and opens an interactive SSH session to it.
/cp
Cp
`crabbox cp` copies files or directories between the host and a Crabbox-owned
/desktop
Desktop
`crabbox desktop` drives a visible desktop session on a lease that was warmed
/doctor
Doctor
`crabbox doctor` runs a preflight before you commit to a long workflow. It is
/egress
Egress
`crabbox egress` gives a lease mediated outbound network: a lease-local browser
/events
Events
`crabbox events` prints the broker's event log for a recorded run.
/heartbeat
Heartbeat
`crabbox heartbeat` refreshes the idle deadline for one owned lease and prints
/history
History
`crabbox history` lists recorded remote command runs from the broker. Each run is
/image
Image
`crabbox image` holds the trusted-operator controls for provider base images:
/init
Init
`crabbox init` onboards the current repository: it writes the minimal config
Paper trading simulator for Polymarket — built for AI agents. MCP server, live order books, strategy backtesting. Install: npx clawhub install polymarket-paper-…
1 views 0 likesAn SSH tool dedicated to addressing all pain points · (macOS/Windows/Linux/Android/iOS)
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0 views 0 likesScholar All-In-One: A research infrastructure for AI agents
0 views 0 likesGive your AI agent a real browser — with a human in the loop. Open-source MCP-native browser agent.
0 views 0 likes同花顺免费开源AI插件FQGate-agent(原插件名 tonghuasun-agent):为 Codex、Claude Code、DeepSeek 等 AI 工具提供本机 A 股实时行情、K 线、Level-2、资讯、账户查询与可选交易能力。
0 views 0 likesA non-linear AI agent workbench — session is a tree: branch anytime, and context follows the branch
0 views 0 likesProduction-grade AutoCAD MCP server for AI agents — 122 tools, dual COM (live AutoCAD) + headless ezdxf engines, ISO GD&T and dimension-tolerance validation for…
0 views 0 likesA DeepSeek coding agent harness: persistent shell, Ultra subagents, auto approval, Chrome MCP and session telemetry
0 views 0 likesWaku Waku! Waku Agent is a local-first AI agent harness you actually own, including loop, memory, eval, all in code built to stay legible as it grows.
0 views 0 likesRemote control for Claude Code, Codex, Grok, and Cursor on Mac or PC. View sessions, send tasks, and drive them remotely from your phone, PIN, or Ring. OpenClaw…
0 views 0 likes