LLM Mart Basic
@llm-mart · Joined Jun 2026
Out-of-core tabular analytics with Vaex — memory-mapped HDF5/Arrow/Parquet via vaex.open, lazy virtual columns, delayed single-pass aggregations on billion-row tables, binned histograms/heatmaps, and vaex.ml transformers on one machine. Vaex is in minimal-maintenance mode (vaex-c
Access the AlphaFold DB of 240M+ AI-PREDICTED protein structures (v6, plus precomputed homodimer/heterodimer complexes) — retrieve models by UniProt accession, download PDB/mmCIF files, and analyze prediction confidence metrics (pLDDT, PAE). Use when a UniProt ID needs a computat
Search and retrieve preprints from arXiv via the Atom API by keywords, authors, arXiv IDs, date ranges, or subject categories. Use when finding or fetching papers in physics, mathematics, computer science, quantitative biology, quantitative finance, statistics, electrical enginee
Query BindingDB for measured protein-ligand binding affinities (Ki, Kd, IC50, EC50) via its keyless REST API or the full TSV download, searching by target (UniProt ID), compound (SMILES), or pathogen. Use when looking up experimental binding constants, profiling inhibitors of a p
Search the bioRxiv preprint server and retrieve paper metadata or download PDFs via its API. Use when finding life sciences preprints by keywords, authors, DOI, date ranges, or categories, or when conducting a biology literature review of not-yet-peer-reviewed work. Part of the A
Access the BRENDA enzyme database via its SOAP API to retrieve kinetic parameters (Km, kcat, Ki), reaction equations, organism data, and substrate-specific enzyme information indexed by EC number. Use when looking up enzyme kinetics, turnover numbers, or substrate specificity for
Query cBioPortal via its keyless REST API for cancer genomics across TCGA, GENIE, MSK-IMPACT and hundreds of studies — somatic mutations, copy-number alterations (GISTIC), mRNA/protein expression, structural variants, and patient-level clinical/survival data. Use when asked how o
Query ChEMBL via the chembl_webresource_client Python client for curated bioactive molecules and drug-like compound libraries at scale — search compounds by structure or physicochemical properties, retrieve bioactivity measurements (IC50, Ki, EC50), and find inhibitors of a targe
Query ClinicalTrials.gov via its API v2 to search trials by condition, drug, location, recruitment status, or phase and retrieve trial details by NCT ID. Use when finding interventional or observational studies, checking trial status and eligibility for patient matching, or expor
Access ClinPGx pharmacogenomics data (the successor to PharmGKB) to query gene-drug interactions, CPIC/DPWG dosing guidelines, drug labels, and pharmacogene records. Use when interpreting pharmacogenes (CYP2D6, CYP2C19, TPMT, DPYD, SLCO1B1), looking up genotype-guided drug dosing
Query NCBI ClinVar via the E-utilities API or FTP for the clinical significance (pathogenicity) of human germline genetic variants, searching by gene, variant, condition, or genomic position and interpreting ACMG/AMP classifications and review-status star ratings. Use when assess
Access the COSMIC catalogue of somatic mutations in cancer to query somatic mutations, the Cancer Gene Census, mutational signatures, and gene fusions (authentication required). Use when curating known cancer driver genes, looking up recurrent somatic mutations in a gene, or inte
Use when conducting security assessments — OWASP Top 10 / API / LLM, CWE Top 25, CVSS scoring — auditing PHP/TYPO3, APIs, frontend, Terraform/K8s/Docker IaC, AWS cloud, AI agent configs, or scanning dependencies.
Look up and apply Python builtin and standard-library time and space complexity when analyzing code, reviewing performance, or comparing operations. Includes implementation and version qualifications. Use for complexity analysis, not general Python syntax questions.
Designs and reviews tests for every complexity, behavioral, and performance claim in documentation. Use when adding or changing claims, auditing claim or API coverage, or creating module complexity tests.
Updates this repository's supported Python range when an old version reaches EOL or a new final version is released. Covers package metadata, CI pins, version references, documentation, translations, public API manifests, tests, and lockfile verification.
Run a user-authored playbook from the vault: a multi-step guided procedure. Lists available global and local playbooks, selects one by trigger, and drives its steps in order — spawning per-step sub-agents or running inline, pausing at review gates.
Cut a booping plugin release — verify the version bump against the last published tag, draft public-voiced release notes, merge the release branch into master, tag, and publish the GitHub release. Use when cutting a vX.Y.Z release of this repo.
Expert guide for long-term episodic memory integration (Mem0, Letta/MemGPT, Zep) and unified context management for autonomous AI agents / Panduan ahli untuk integrasi memori episodik jangka panjang dan manajemen konteks agen AI otonom.
Master ideation protocol & architectural orchestrator with Modern Web Guidance. Validates design ideas and orchestrates all specialized vibes-plug skills before coding begins / Protokol ideasi utama & orkestrator arsitektur dengan Modern Web Guidance. Memvalidasi ide desain dan m
/explain-issue-fix
Explain issue fix
Explain how tasks in an issue were implemented with detailed breakdown
/find
Find
Search and locate tasks across all orchestrations using various criteria.
/five
Five
Apply the Five Whys root cause analysis technique to systematically investigate issues
/fix-github-issue
Fix github issue
Analyze and fix a GitHub issue with comprehensive testing and verification
/fix-issue
Fix issue
Fix a specific issue or problem with the given identifier or description
/fix-pr
Fix pr
Fetch unresolved comments for current branch's PR and fix them
/future-scenario-generator
Future scenario generator
Generate and analyze future scenarios with plausibility scoring, trend integration, and uncertainty quantification.
/generate-api-documentation
Generate api documentation
Auto-generate API reference documentation
/generate-linear-worklog
Generate linear worklog
You are tasked with generating a technical work log comment for a Linear issue based on recent git commits.
/generate-test-cases
Generate test cases
Generate comprehensive test cases automatically
/generate-tests
Generate tests
Generate comprehensive test suite for $ARGUMENTS following project testing conventions and best practices.
/git-status
Git status
Show detailed git repository status
/hotfix-deploy
Hotfix deploy
Deploy critical hotfixes quickly
/husky
Husky
Verify repository is in working state by running CI checks and fixing issues
/implement-caching-strategy
Implement caching strategy
Design and implement caching solutions
/implement-graphql-api
Implement graphql api
Implement GraphQL API endpoints
/init-project
Init project
Initialize new project with essential structure
/initref
Initref
Build reference documentation by creating markdown files and updating CLAUDE.md
/issue-to-linear-task
Issue to linear task
Convert GitHub issues to Linear tasks
/issue-triage
Issue triage
Triage and prioritize issues effectively
Make any song you can imagine
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