Claude commands

Search ENCODE experiments by assay, organ, biosample, or target

Assess ENCODE experiment quality using audit counts and replicate counts

Store, check, or clear ENCODE API credentials for restricted data

Log derived files and trace provenance back to ENCODE source data

Download ENCODE files (BED, FASTQ, BAM, bigWig) with MD5 verification

Cross-reference ENCODE data with PubMed, GEO, ClinicalTrials, and bioRxiv

Check if two ENCODE experiments are compatible for combined analysis

Generate ENCODE citations for publications, grants, and presentations

List, search, and inspect ENCODE files by format, type, and assembly

Track ENCODE experiments locally with publications and provenance

Search ENCODE experiments by assay, organ, biosample, or target

Assess ENCODE experiment quality using audit counts and replicate counts

Store, check, or clear ENCODE API credentials for restricted data

Log derived files and trace provenance back to ENCODE source data

Download ENCODE files (BED, FASTQ, BAM, bigWig) with MD5 verification

Cross-reference ENCODE data with PubMed, GEO, ClinicalTrials, and bioRxiv

Check if two ENCODE experiments are compatible for combined analysis

Generate ENCODE citations for publications, grants, and presentations

List, search, and inspect ENCODE files by format, type, and assembly

Retrieve a NetSuite record by type and internal ID

Drill into an N-central scheduled task's outcome - aggregate status down to per-device results and output

Sweep active issues across N-central customers, grouped by severity and probable root cause

Inventory devices for an N-central customer or site with class, warranty, and monitor-health breakdown

Trace an email through Mimecast by sender, recipient, subject, or date range